dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00755
Location and strand information: 186781 - 188061 (-)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.425
Protein molecular weight: 48276.11
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00756
Location and strand information: 188323 - 189444 (-)
Family: GH105
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.3893
Protein molecular weight: 43526.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00757
Location and strand information: 189632 - 192388 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.8842
Protein molecular weight: 104475.87
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00758
Location and strand information: 192378 - 194780 (-)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase BoGH2A
Protein isoelectric point: 7.0967
Protein molecular weight: 90511
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00759
Location and strand information: 195025 - 195981 (+)
Family: CE4|CE0
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.2399
Protein molecular weight: 36764.18
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00760
Location and strand information: 196122 - 197432 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9798
Protein molecular weight: 49738.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00761
Location and strand information: 197371 - 197535 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00762
Location and strand information: 197573 - 201907 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00763
Location and strand information: 202146 - 203783 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 9.7464
Protein molecular weight: 61005.1
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00764
Location and strand information: 203843 - 205936 (-)
Family: PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.3621
Protein molecular weight: 78102.57
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00765
Location and strand information: 205988 - 207718 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00766
Location and strand information: 207740 - 210604 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00767
Location and strand information: 210642 - 212657 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00768
Location and strand information: 212682 - 215900 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00769
Location and strand information: 215982 - 217607 (-)
Family: null
Protein type: null
Protein description: Putative fimbrium tip subunit Fim1C

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00770
Location and strand information: 217667 - 218692 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00771
Location and strand information: 219374 - 220315 (-)
Family: GH43|CBM32|GH43_18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.77
Protein molecular weight: 35728.52
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00772
Location and strand information: 220557 - 223436 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 8.0875
Protein molecular weight: 110008.28
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00773
Location and strand information: 223447 - 224685 (+)
Family: CE12
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.4412
Protein molecular weight: 46377.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000029_3|CGC4
Gene ID: MGYG000000029_00774
Location and strand information: 224710 - 226227 (+)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.4251
Protein molecular weight: 55945.13
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000029_00755	CE12_e46
MGYG000000029_00756	GH105_e14\|3.2.1.172	pectin
MGYG000000029_00757	GH106_e0\|3.2.1.174	pectin
MGYG000000029_00758	GH2_e122
MGYG000000029_00759	CE4_e36
MGYG000000029_00760	GH28_e95\|3.2.1.-	pectin
MGYG000000029_00763	CE12_e40
MGYG000000029_00764
MGYG000000029_00771	GH43_e26\|CBM32_e74\|3.2.1.55	xylan
MGYG000000029_00772	GH2_e63\|3.2.1.23	beta-galactan
MGYG000000029_00773	CE12_e46
MGYG000000029_00774	GH28_e26\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000029_00755	hypothetical protein	CAZyme	186781	188061	-	CE12
MGYG000000029_00756	hypothetical protein	CAZyme	188323	189444	-	GH105
MGYG000000029_00757	hypothetical protein	CAZyme	189632	192388	+	GH106
MGYG000000029_00758	Beta-galactosidase BoGH2A	CAZyme	192378	194780	-	GH2
MGYG000000029_00759	hypothetical protein	CAZyme	195025	195981	+	CE4\| CE0
MGYG000000029_00760	hypothetical protein	CAZyme	196122	197432	-	GH28
MGYG000000029_00761	hypothetical protein	null	197371	197535	-	No domain
MGYG000000029_00762	Sensor histidine kinase RcsC	TF	197573	201907	-	HTH_AraC
MGYG000000029_00763	hypothetical protein	CAZyme	202146	203783	+	CE12
MGYG000000029_00764	Rhamnogalacturonan endolyase YesW	CAZyme	203843	205936	-	PL11_1
MGYG000000029_00765	hypothetical protein	null	205988	207718	-	SusD-like_3\| SusD_RagB
MGYG000000029_00766	hypothetical protein	TC	207740	210604	-	1.B.14.6.1
MGYG000000029_00767	hypothetical protein	null	210642	212657	-	SusD-like_3\| SusD_RagB
MGYG000000029_00768	hypothetical protein	TC	212682	215900	-	1.B.14.6.1
MGYG000000029_00769	Putative fimbrium tip subunit Fim1C	null	215982	217607	-	Mfa_like_1
MGYG000000029_00770	hypothetical protein	null	217667	218692	-	Mfa_like_1
MGYG000000029_00771	hypothetical protein	CAZyme	219374	220315	-	GH43\| CBM32\| GH43_18
MGYG000000029_00772	Beta-galactosidase	CAZyme	220557	223436	+	GH2
MGYG000000029_00773	hypothetical protein	CAZyme	223447	224685	+	CE12
MGYG000000029_00774	hypothetical protein	CAZyme	224710	226227	+	GH28
Protein ID	Protein Name	Type	Start	End	Strand	Signature